dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00929
Location and strand information: 484915 - 487647 (-)
Family: 1.B.14.6.12
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00930
Location and strand information: 487650 - 488339 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00931
Location and strand information: 488557 - 490662 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00932
Location and strand information: 490695 - 493871 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00933
Location and strand information: 494161 - 495342 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00934
Location and strand information: 495678 - 499037 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00935
Location and strand information: 499068 - 501371 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00936
Location and strand information: 501581 - 502909 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00937
Location and strand information: 502921 - 504759 (+)
Family: PL11
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.265
Protein molecular weight: 68826.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00938
Location and strand information: 504789 - 507794 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.9009
Protein molecular weight: 114375.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00939
Location and strand information: 507827 - 509653 (+)
Family: CBM2|PL11_1|PL11|CBM35
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 4.4705
Protein molecular weight: 67119.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00940
Location and strand information: 509659 - 513015 (+)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3611
Protein molecular weight: 127783.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00941
Location and strand information: 513109 - 516312 (+)
Family: PL11_1|GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2632
Protein molecular weight: 118985.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000211_2|CGC12
Gene ID: MGYG000000211_00942
Location and strand information: 516340 - 517746 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8642
Protein molecular weight: 53090.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000211_00937	PL11_e1
MGYG000000211_00938	GH2_e11\|3.2.1.31	beta-glucuronan
MGYG000000211_00939	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000000211_00940	PL26_e0
MGYG000000211_00941	GH28_e36\|3.2.1.67\|3.2.1.-	pectin
MGYG000000211_00942	GH105_e35\|3.2.1.172	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000211_00929	hypothetical protein	TC	484915	487647	-	1.B.14.6.12
MGYG000000211_00930	hypothetical protein	null	487650	488339	-	No domain
MGYG000000211_00931	hypothetical protein	null	488557	490662	-	SusD-like_3\| SusD_RagB
MGYG000000211_00932	hypothetical protein	TC	490695	493871	-	1.B.14.6.1
MGYG000000211_00933	hypothetical protein	null	494161	495342	+	Arm-DNA-bind_5\| Phage_int_SAM_5
MGYG000000211_00934	hypothetical protein	TC	495678	499037	+	1.B.14.6.1
MGYG000000211_00935	hypothetical protein	null	499068	501371	+	SusD-like_3\| SusD_RagB
MGYG000000211_00936	hypothetical protein	null	501581	502909	+	PD40\| PD40
MGYG000000211_00937	Rhamnogalacturonan endolyase YesW	CAZyme	502921	504759	+	PL11
MGYG000000211_00938	Beta-galactosidase	CAZyme	504789	507794	+	GH2
MGYG000000211_00939	Rhamnogalacturonan endolyase YesW	CAZyme	507827	509653	+	CBM2\| PL11_1\| PL11\| CBM35
MGYG000000211_00940	hypothetical protein	CAZyme	509659	513015	+	PL26
MGYG000000211_00941	hypothetical protein	CAZyme	513109	516312	+	PL11_1\| GH28
MGYG000000211_00942	hypothetical protein	CAZyme	516340	517746	+	GH105
Protein ID	Protein Name	Type	Start	End	Strand	Signature